BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B09SP1|AL428676
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 1716 0.0
>3x_Contig1428
Length = 9146
Score = 1716 bits (864), Expect = 0.0
Identities = 872/877 (99%)
Strand = Plus / Plus
Query: 1 agtaccttgttttacatggcaatatgagaaaagacgtaacgtaacgtttcccatggcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2339 agtaccttgttttacatggcaatatgagaaaagacgtaacgtaacgtttcccatggcaag 2398
Query: 61 gaacttccggcaacaagctacaagttgtaatacagtaataaaactacagacggggatccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2399 gaacttccggcaacaagctacaagttgtaatacagtaataaaactacagacggggatccg 2458
Query: 121 ctagattcaggttcttcttgtttttcacatactcgtaatactgtgtgcgttcttacatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2459 ctagattcaggttcttcttgtttttcacatactcgtaatactgtgtgcgttcttacatca 2518
Query: 181 ctttgtattcttttttcttgagatcattacctagtacgatgtacagaacacgaaattgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2519 ctttgtattcttttttcttgagatcattacctagtacgatgtacagaacacgaaattgac 2578
Query: 241 aagggatccaattctcttaccgatggtgtttcggatgtttcaggtttccccggttcacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2579 aagggatccaattctcttaccgatggtgtttcggatgtttcaggtttccccggttcacgt 2638
Query: 301 ttctgacataataaavaccttctatttaccggtattctggaccttttggtcctgggcatc 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2639 ttctgacataataaagaccttctatttaccggtattctggaccttttggtcctgggcatc 2698
Query: 361 tttttgttgcttatgaataavaaaaaatagctgaaaggaaaccgaagcttgatccatctt 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2699 tttttgttgcttatgaataagaaaaaatagctgaaaggaaaccgaagcttgatccatctt 2758
Query: 421 cgcctcattaggtaatactttgttcagagtaacccgtaaccgcaactgcgtagttcctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 cgcctcattaggtaatactttgttcagagtaacccgtaaccgcaactgcgtagttcctgt 2818
Query: 481 agattatttagttggtggttggatttccccatcactattggatatgtccagtgacgggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819 agattatttagttggtggttggatttccccatcactattggatatgtccagtgacgggag 2878
Query: 541 attggaaagtgcaaaaaaaacaaaataaagaaaaaagagccagttatcagcatgagcttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2879 attggaaagtgcaaaaaaaacaaaataaagaaaaaagagccagttatcagcatgagcttt 2938
Query: 601 cctttcggatatgacatcacttggcctatggatcctagtatcatgtatatctcggggaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2939 cctttcggatatgacatcacttggcctatggatcctagtatcatgtatatctcggggaga 2998
Query: 661 gcctcaacgctcggcatctggaattgatttcctactaccggctgggaggccttattgaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2999 gcctcaacgctcggcatctggaattgatttcctactaccggctgggaggccttattgaat 3058
Query: 721 attcttaccccttcaaaggggcccagataatgccgtaataatcggttttaggaactggga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3059 attcttaccccttcaaaggggcccagataatgccgtaataatcggttttaggaactggga 3118
Query: 781 atcacgtgatgtcacgtgatttccagtncacgtaaatsatattcctctttcctttaccta 840
||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||
Sbjct: 3119 atcacgtgatgtcacgtgattcccagttcacgtaaatgatattcctctttcctttaccta 3178
Query: 841 caggttatggcatttacactatatcctgtatagaaca 877
|||||||||||||||||||||||||||||||||||||
Sbjct: 3179 caggttatggcatttacactatatcctgtatagaaca 3215
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6315
Number of Sequences: 1807
Number of extensions: 6315
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)